CPT, your 12-100 appears to be very slightly soft in the top LH corner. However, keep in mind that you are effectively looking at a 50 inch print at screen distances! I doubt that you would see much, if any, difference even in a 50" print ...
Otherwise, hard to see any really significant differences between the lenses. I have only examined them on my tablet so far. Maybe I will see something else when I look on my normal workstation.
[EDIT]
I have now downloaded and examined them on my w/s. Definite differences, particularly on the LH side, top and bottom. However, I reiterate what I said about looking at 100% images at 600-800 mms viewing distance.
Most of your 12-100 shots were taken at 1/8th second. This could make a very significant difference to sharpness unless your tripod is massive, and well damped.
I also have the 14-54 MkII, and it is a cracker of a lens. Better optically than any of my mFTs lenses IMHO, specially at f/5.6 ...
Improve your lighting and shoot both lenses at f/5.6 and f/8 and at least 1/100th second. You might find that the 12-100 is actually better than the 14-54 at f/8. My copy seems to be ...
[end edit]
The last test shot using the 12-100 has pretty perceptible motion blur (camera), probably due to the 1/8th second shutter speed.
From my own less stringent tests of the high res mode on my E-M1 MkII, I know that anything less than 4s shutter delay will cause blur that causes an unusable image. I was using a Manfrotto 190 series tripod with Manfrotto pan/tilt head for these shots. Even with the 4s delay, the results were slightly blurred unless I further damped the tripod by pushing down on the head mounting plate with my finger. Old astronomical telescope trick when using high magnification eyepieces.
Moral of this story is that it is all but impossible to take 'perfect' test shots unless one uses a very stable, heavy tripod, and uses multigrips to tighten all the mounting screws ...
I wouldn't worry about what you are seeing. I'll bet that you cannot see any perceptible difference in real world shots. Am I right?
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